LBMGE Genomapper

Genomapper BLAST psiBLAST Mulalbla Multalin Genes & Genomes BLAST (restricted) Genome Guts COG Guess INTERPROScan CDD search Pattern search Sequence Patterns COG Trees

Pyrococcus abyssi >PAB0626 Zinc-transporting ATPase (translocating P-type) (EC 3.6.3.5) MMPRKLKLEGLDCASCAYEIEEALRKEGFKFAVVNFATKEAIIEGDIEKAKEVIKKVEPDVEVVEEVHIHDHAHGEFEKR TIYFIGISLVLFTIGILMRYYYAIDNTLVFGLFLASYLISGWKVLKSAIVNSLNGNVFDENFLIAVATIGAFLIKEYPEG VAVMLFYVIGEFLQDMAVDKSRRSIKALLALKAEYANLVRDGTVVKVKPEELKVGDIIIVKPGEKVPVDGVIIEGTSSVD TSALTGESMPRTVKEGDEILSGMINLTGLLKVRVTRELSESTVSRILELVENASARKAKTEKFITRFAHYYTPAVVGIAT LIATVPPLVFKESFTSWVYRALVILVISCPCALVLSIPLGYFGGIGRAAKEGILIKGSNYLDALKDASIVAFDKTGTLTK GVFKVTKIETRNGFTEEEILRFAALAEAHSNHPIAKAIREAYGKEINEAEITEYEEIAGHGVRARIDSVEVMVGNDKLLH RSNIEHDTCKVKGTIAHVVIDGQYAGYIVISDEIKEDAHLAVKELKRLGVRKVVMVTGDSRDVAEEIAKQLGLDGFYAEL LPEDKVKIIEKLEKEKGNGKLVFVGDGINDAPVLARADVGVAMGALGSDAAIETADVVIMDDKPSKLPKAIQIARKTQRI VWENIIFALGVKLAFIGLGIFGKATMWEAVFADVGVALIAVFNAMRVLR

Supplementary options
Additional orf sequence data	See Genomic Environment
Search GenBank with PSI-Blast at NCBI	Search Complete Genomes DataBase with Blast at LBMGE
Search InterPro Database at LBMGE	Search CDD Database at LBMGE
Determine COG functional Category (microbial)	Determine COG functional Category (eukarial)
See this orf in P. abyssi Data Base

^__________ GenBank id: 14521140 Gene name: pacS COG: P COG2217 Cation transport ATPase Taxon: 272844 Lineage: Archaea: Euryarchaeota: Thermococci: Thermococcales: Thermococcaceae: Pyrococcus: Pyrococcus abyssi: Pyrococcus abyssi GE5
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