LBMGE Genomapper

Genomapper BLAST psiBLAST Mulalbla Multalin Genes & Genomes BLAST (restricted) Genome Guts COG Guess INTERPROScan CDD search Pattern search Sequence Patterns COG Trees

Pyrococcus abyssi >PAB0628 appB-2 oligopeptide transport system permease protein appB MMSGIKRYLLRKTMIYILTFFFAVTIDFIIPRIMPGDPIAVLLSRFATLPEATKYLHSYFVQAFGLDKPLWEQYISFWKA VLHGDLGISIYYYPKPVAEILKEALPYDLALLFPALVASWFVGNWLGALAGKNKKLDNYLMPIFYFLQASPYFWFAILLS YLFTFKLGWFPISGAYSYGIIPSLSWEFIKDYLHHWTLPFLSLFMVQLGGWAIGMRNMIIYEIEADYIRYLESLGVSEKI LMKHAFKNAMLPQVTGLALQLGLLVAGNVTVQVVFSYPGIGYVLMQGIMNQDYFLIQGAFLVIILTVLVANFVIDLLYAI IDPRVRISYTEEGA

Supplementary options
Additional orf sequence data	See Genomic Environment
Search GenBank with PSI-Blast at NCBI	Search Complete Genomes DataBase with Blast at LBMGE
Search InterPro Database at LBMGE	Search CDD Database at LBMGE
Determine COG functional Category (microbial)	Determine COG functional Category (eukarial)
See this orf in P. abyssi Data Base

^__________ GenBank id: 14521144 Gene name: appB-2 COG: EP COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Taxon: 272844 Lineage: Archaea: Euryarchaeota: Thermococci: Thermococcales: Thermococcaceae: Pyrococcus: Pyrococcus abyssi: Pyrococcus abyssi GE5
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