LBMGE Genomapper

Genomapper BLAST psiBLAST Mulalbla Multalin Genes & Genomes BLAST (restricted) Genome Guts COG Guess INTERPROScan CDD search Pattern search Sequence Patterns COG Trees

Pyrococcus abyssi >PAB1193 Hypothetical protein MKRRLGFVLALLAVVGLLVTPLTLPVYAAEQGKPVETIYLTIRTNEEAAISDVAKGGANGGLDVFLYPISGKEFKNLPKD ILDKLRLIRSVGGEVAIQINPVHDDDNPYTVTVGDKVYFNPFAIKEVRFALNYLINRQYIVSNIFGGSAQPMYGCVRPST GAGIYFEPVYKALGFTPTGDLAKAQQMVEEAMKKAAEELKKEGHKLELKTGEDGKKWWYFDGEPVTVKFVIRVEDERKDI GLYVADLIEKYLHFKVEKLLWNAQKAIPAVYYKDPKNFEWQLYTAGWIITSNVKWPDWQTAAFYSTIWGKQPAAVGWSYT PETTVKDLVDYFGGPEKLIDALGLKYYNTPEKLKELYDMNIDPIVEMINYGETTFNNKTYVLEEGNVDQYWDLQKISMAQ GIMDGLVVFIAEQWEYFAVNKERVTRIAADVSAGLYSWWMWRGLETVDGVAYVAEFSQGGSIYTNAMNPIGGGGDIYGNM VMRAISDPATYVNPATGDVMPGRCTFKVERGPFTIPKNAIVYNSTLKKWVPQHAGEKAKVRVTYTCKFGKWHDGTPMTME DIKAAIAFSYEWSYKDGDNDPYYDEAMGASTRTLEQTLGFVFVNPTTYIVYSNITHPVADDQIAGNNAWWATVPWYLRHA MEELVANPQKYGVTNNYTFTQAEGPRWLDLLVKDHVEDLKKVIEKLIEEKDVPWYLQGEITPDEAVKAYKSLLDFINKHG HAYDSNGPFYLDKYDPDKMLMVFKRFSGNPIPPDYWKKTLLIARLVPKGAEVPARVMAGKPLTVKVMLTLKEEFPDWGEK PADRGYVTVSIVDANGNEVYSGEAKLTTAGTFELNVPGDETKGWSTGKYTAIIRGGLSKEVTSFTIKKTFVVIKPTTTSP QQTTTSTPQQTSSPTATGTSPTETTTKGGICGPAILVGLAVLPLLLRRRDN

Supplementary options
Additional orf sequence data	See Genomic Environment
Search GenBank with PSI-Blast at NCBI	Search Complete Genomes DataBase with Blast at LBMGE
Search InterPro Database at LBMGE	Search CDD Database at LBMGE
Determine COG functional Category (microbial)	Determine COG functional Category (eukarial)
See this orf in P. abyssi Data Base

^__________ GenBank id: 14521950 Gene name: - COG: R COG3889 Predicted solute binding protein Taxon: 272844 Lineage: Archaea: Euryarchaeota: Thermococci: Thermococcales: Thermococcaceae: Pyrococcus: Pyrococcus abyssi: Pyrococcus abyssi GE5
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