LBMGE Genomapper

Genomapper BLAST psiBLAST Mulalbla Multalin Genes & Genomes BLAST (restricted) Genome Guts COG Guess INTERPROScan CDD search Pattern search Sequence Patterns COG Trees Genome Syntenizer

Pyrococcus abyssi >PAB1336 Methyl accepting chemotaxis protein MQFRKKIILMAIMSAVITMAIFGGVTIYSFNKVYGVIKGEIQAPAIEQGGQLAMSAAEVAEKMFDDFFARVADYGTMATE VVKEAYAKGLDSNETAMREFLLSEFKKIKELNKDVSYVYFGDEEGHMYMYPPDELPEGYDPRVRPWYVQAKEKGGAIITE PYRDAATGQWVITYAVPVYVNGQFKGVIGLDVFVSTLLNETKKIKLGKTGYIAIIDQNGMTLVHPNEEFINKLNIFQVPE LKDLADELKKGKDEGYVLYTFQGIKKIGGYKRLKTTGWIVVATVPLSDITGPILSATDTAINKMKMIVIQGFAVGFVIIV AILVVIYKIASNTLAPLEKLKYAAQALAEGRLKQVSEYLKQIRYLERDEIGALIQAFEAVSKDLVGTLNAISKKLERLAE GDLSNGLTVEVRGELRDIIEDIRSVTETFRESIGSLVEMANDLEKRANALAQVSKDVTEAINQVNEAIQQVSIEAQRQQE TINEITDGMRLVAQTSEESVRAMEEFSGAVTEVVSIANEGSQKGDEALKRIEDIQHMMSRIEETVSKVAEMSRNIEEITN VITSIAEQTNLLALNAAIEAARAGEAGRGFAVVAQEIRKLAEESKQAADNIKSIIDKITDEIKEAVEATKEGVSVIGESS ETLRDTIGYLANIATLLQETSERMTTVKEQIVRTQEEVDKALRALENLAASAEETTASAEEVSSAIEQQTAAIEELRRAA QELKDMVGRMRQIVGKFKV

Supplementary options
Additional orf sequence data	See Genomic Environment
Search GenBank with PSI-Blast at NCBI	Search Complete Genomes DataBase with Blast at LBMGE
Search InterPro Database at LBMGE	Search CDD Database at LBMGE
Determine COG functional Category (microbial)	Determine COG functional Category (eukarial)
See this orf in P. abyssi Data Base

^__________ GenBank id: 14521748 Gene name: tlpC COG: NT COG0840 Methyl-accepting chemotaxis protein Taxon: 272844 Lineage: Archaea: Euryarchaeota: Thermococci: Thermococcales: Thermococcaceae: Pyrococcus: Pyrococcus abyssi: Pyrococcus abyssi GE5
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