LBMGE Genomapper

Genomapper BLAST psiBLAST Mulalbla Multalin Genes & Genomes BLAST (restricted) Genome Guts COG Guess INTERPROScan CDD search Pattern search Sequence Patterns COG Trees Genome Syntenizer

Pyrococcus abyssi >PAB1633 Hypothetical protein, containing KH nucleic acid binding domain MLVGGETMKVIVPDTSVIVDGRLTQYLKRVREKVKVVVPEAVVAEIEHQANEGKAIGHTGLEELKKLRELADKGKILLEF YGERPELWQIKRAKAGEIDHMVREVARELNAVLITGDQVQRDIAIAKGIEVIYLESKREPKTRLEDFFDDETMSVHLKAG VRPLAKKGRPGEWKLVPIRDKPLDEEELEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFSDRIEITAV RPIKKLSIEDYNLSGKLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTMEKPRDLQVSEEITQYTALNGS MEKTGDVLLLVRPDYTIFDEMRKTSDFLIYTDLRLAGVGMVGVVHATKPIDAIQRFIGRVELGMIPQIVDTVIFIKGGKV AKVLTLEYKVKVPTGMKEEDLARPVIEVRDFETGQLEYEIYTFGEEVSVVPIKKEEKAPALKLAEKRLKQEIQRFLPDVY TEVEVVTPHKAVVYADEYDIPAIIGKKGKRIQELEKRLGISIEVKSLSEKQPEVKEKIPVEIDEKKKSIVLRVSPDYARK PLRFYAGNEYVFTATPSKKGVVKVSKSSPVGKLLQKYLREGFEIWASL

Supplementary options
Additional orf sequence data	See Genomic Environment
Search GenBank with PSI-Blast at NCBI	Search Complete Genomes DataBase with Blast at LBMGE
Search InterPro Database at LBMGE	Search CDD Database at LBMGE
Determine COG functional Category (microbial)	Determine COG functional Category (eukarial)
See this orf in P. abyssi Data Base

^__________ GenBank id: 14521315 Gene name: - COG: R COG1855 ATPase (PilT family) Taxon: 272844 Lineage: Archaea: Euryarchaeota: Thermococci: Thermococcales: Thermococcaceae: Pyrococcus: Pyrococcus abyssi: Pyrococcus abyssi GE5
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