Genomapper BLAST  psiBLAST  Mulalbla  Multalin  Genes & Genomes  BLAST (restricted)  Genome Guts  COG Guess  INTERPROScan  CDD search  Pattern search  Sequence Patterns  COG Trees 
Pyrococcus abyssi
>PAB2147 ABC-type transport system, ATPase component, substrate unknown
MRKSINQLIRLLSYLRGHAVHFLIGLFLIILMSYTNSIVPVLIRNAIDKGVSTGAYKVAIRYGLLILLVGVLNGVFSLAG
RYLLVKAAQYAVYYLRMDAFRAIQRHEMEFFDKTFSGQLISRITNDTERITRFLSFRVRMLLYSIFLIIISLYYMVRMNI
TLTMVALITIAIVVGLNTTYAMKVRPIYDKIRHQTGVIASIATGTIAGIKTIKSLSVEENVQTKFSQENEELYSLNVKAM
KITALYGNAPFLVLGLAMSTMFYYGGKAIIQNTLTVGELVAFLTYMLTMMWPLRALGFTIGDIQRSLAAASRLFDVIDSA
PKSIDPPDAVEISNPRGEIEFRDVWLTYHTGRTVLKGVSFKVKPGEKVLITGPPGSGKSSILKLIARFYKPTKGEVLIDG
VNVAKIKTENLRKIVAYVPQEPFIFNRSIRENIALAKPNATQEEVERAAKIAKIHDFIASLPKGYDTVVGEKGITLSGGQ
RQRIALARAMLMNPKIVLLDDPVSNLDAETEKKLVEDLKEILQDKTALIVSQRLSLVKLVDRVIVMKDGKIVEDGKPEEL
IKKGGIFSEMMKAGGVYGG





Supplementary options


Additional orf sequence data

See Genomic Environment


Search GenBank with PSI-Blast at NCBI

Search Complete Genomes DataBase with Blast at LBMGE


Search InterPro Database at LBMGE

Search CDD Database at LBMGE


Determine COG functional Category (microbial)

Determine COG functional Category (eukarial)



See this orf in P. abyssi Data Base



__________
GenBank id: 14520516                   
Gene name:  -                                                                                               
COG:        V COG1132 ABC-type multidrug transport system, ATPase and permease components                   
Taxon:      272844 
Lineage:    Archaea:                                                                                        
            Euryarchaeota:                                                                                  
            Thermococci:                                                                                    
            Thermococcales:                                                                                 
            Thermococcaceae:                                                                                
            Pyrococcus:                                                                                     
            Pyrococcus abyssi:                                                                              
            Pyrococcus abyssi GE5                                                                           

__________