Pyrococcus abyssi
>PAB2266 dp1/polB intein containing DNA polymerase II small subunit (2.7.7.7)
MDELVKALERAGYLLTPSAYYLLVDHFKEGKFSLVELVKFAKSKGVFIIDGDLAYEFLQFLGLGVPQEIKESYISTGEEA
EKTVESQETRASELEEGGVSQVSSGELQELKEESPEISTTEEEIGGLELVQSSISTGSEVEYNNGENGESVVVLDKYGYP
ILYAPEEIGEEKEYSKYEDVVIEWNPSVTPVQIEKNYEVKFDVRQVKLRPPKVKNGSGKEGEIIVEAYASLFKSRLSKLK
RILRENPEISNVVDIGKLNYVSGDEEVTIIGLVNSKRETNRGLIFEVEDKTGIVKVFLPKDSEDYREAFKVLPDAVVAFK
GFYSKKGIFFANKFYLPDVPLYRKQKPPLEEKVYAILISDIHVGSREFCEKAFLKFLEWLNGHVESKEEEEIVSRVKYLI
IAGDVVDGIGIYPGQYSDLVIPDIFDQYEALANLLANVPEHITMFIGPGNHDAARPAIPQPEFYKEYAKPIYKLKNAIII
SNPAVIRLHGRDFLIAHGRGIEDVVSFVPGLTHHKPGLPMVELLKMRHLAPTFGGKVPIAPDPEDLLVIEEVPDLVQMGH
VHVYDAVVYRGVQLVNSATWQAQTEFQKMVNIVPTPAKVPVVDVESARVVKVLDFSGWC



Supplementary options

Additional orf sequence data

See Genomic Environment

Search GenBank with PSI-Blast at NCBI

Search Complete Genomes DataBase with Blast at LBMGE

Search InterPro Database at LBMGE

Search CDD Database at LBMGE

Determine COG functional Category (microbial)

Determine COG functional Category (eukarial)

See this orf in P. abyssi Data Base

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GenBank id: 14520339                   
Gene name:  -                                                                                               
COG:        L COG1311 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B             
Taxon:      272844 
Lineage:    Archaea:                                                                                        
            Euryarchaeota:                                                                                  
            Thermococci:                                                                                    
            Thermococcales:                                                                                 
            Thermococcaceae:                                                                                
            Pyrococcus:                                                                                     
            Pyrococcus abyssi:                                                                              
            Pyrococcus abyssi GE5                                                                           

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