LBMGE Genomapper

Genomapper BLAST psiBLAST Mulalbla Multalin Genes & Genomes BLAST (restricted) Genome Guts COG Guess INTERPROScan CDD search Pattern search Sequence Patterns COG Trees

Pyrococcus abyssi >PAB2337 nrdD anaerobic ribonucleoside triphosphate reductase MLLRSNEDKSILMSNLCRNIGFNIQKAYNPYSQHILIGQNIQVIRMEEVSRDIISEYAKWQSLDVLENANRYPGPSGFFA YVMEEALKDSLNLIPEIGRRAHFSGEIYIHKLPYSLYIPYCTGHSIARLLEKGLKTPTIISRPARHFDTFVDHVANYLIT LQHYFSGAQAFSSVEWYAGPFIRKENLDERKIKQNIQRLVYNLNYPTRIGLQTPFTNFTVTLDAPKKMLEGDYAVYDGKK VAPLGEYEEEAKKFFVALTQVLREGDAIGQPFTFPIPTIMVTAKMLWDDPEVFEAVFTTAAKRGSFYWLNTNVVDPDASY AMCCRLNIDKNEFMYAFGLSGKSSEEEALERLERQRFGGLWAMPDVTGSINVTTVNLPRIALKARDDDEFWEEYERVLEI VRITTEWFRDRYISLIRNYPHMYSMITTYLEEFPSSHFNTIGILGLPEAAAIYLNDPKLWIEGSRRDWLEATNIMKEMVE FATSKAREWMRKTGVPWNVEEVPGESAAAKLAIKDARDFPEVKEFLSDPENPIYSTSIAPYYGSLELADRIRIEEKVQRS FTGGVMMHIFLGEEPDPEALAQLTKKLMKTELVYWSYTPAITVCNSCGYSTTGLYTHCPRCGSENVEIWSRIIGYYRPLR NWNPFRKKEFWTRKHYTG

Supplementary options
Additional orf sequence data	See Genomic Environment
Search GenBank with PSI-Blast at NCBI	Search Complete Genomes DataBase with Blast at LBMGE
Search InterPro Database at LBMGE	Search CDD Database at LBMGE
Determine COG functional Category (microbial)	Determine COG functional Category (eukarial)
See this orf in P. abyssi Data Base

^__________ GenBank id: 14520240 Gene name: - COG: F COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase Taxon: 272844 Lineage: Archaea: Euryarchaeota: Thermococci: Thermococcales: Thermococcaceae: Pyrococcus: Pyrococcus abyssi: Pyrococcus abyssi GE5
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