LBMGE Genomapper

Genomapper BLAST psiBLAST Mulalbla Multalin Genes & Genomes BLAST (restricted) Genome Guts COG Guess INTERPROScan CDD search Pattern search Sequence Patterns COG Trees

Pyrococcus abyssi >PAB2363 appC-2 oligopeptide transport integral membrane protein MSLKSTLKIALKNKKFKVGFIIVIIMALIALFGPLITPFDNMGYYPLKFGNTTYPKPGTPALPPMSSDTIYGPEGIVNVT HYLGTDSFGRDIYAQLTYGMRSSFLIGITAGGLATILGLLIGFIAGYKGGWIDEVLMMITNIMLVIPTMALLIIIAAYLP YRGVGIESVIIGLTAWPWTARAVRAQTLSLKNREFIHLAKLSGLGDMKIIFDQIMPNIISYVFMVFILQFGGSILAAVGL DFIGLGPTRGMSLGIMLQQAVLWNAVTLGYWWWAIPPGLVIAILITGLYFINTGLDEVFNPRLRGE

Supplementary options
Additional orf sequence data	See Genomic Environment
Search GenBank with PSI-Blast at NCBI	Search Complete Genomes DataBase with Blast at LBMGE
Search InterPro Database at LBMGE	Search CDD Database at LBMGE
Determine COG functional Category (microbial)	Determine COG functional Category (eukarial)
See this orf in P. abyssi Data Base

^__________ GenBank id: 14521145 Gene name: appC-2 COG: EP COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Taxon: 272844 Lineage: Archaea: Euryarchaeota: Thermococci: Thermococcales: Thermococcaceae: Pyrococcus: Pyrococcus abyssi: Pyrococcus abyssi GE5
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