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11/1/96
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The content the server is now indexed. Any particular term can be easily found anywhere in the server's pages.
Go to the LBMGE Server Index Search Form page and submit your query.
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11/1/96
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On Line Search in the Reference Data Base of the laboratory.
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11/13/96:
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Added Prof. Patrick Forterre's HomePage.
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11/15/96
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DNA topoisomerases of the hyperthermophilic archaeon Pyrococcus furiosus Poster by A. Bergerat online.
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11/20/96
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Abstract Book of " 1er Colloque Francophone sur la Biologie Moléculaire des Thermophiles" On Line .
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11/26/96
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The Links Page has been added. It's aim is to summaries various useful links for people in the laboratory.
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12/12/96
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Added Projects Page (but still under construction).
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12/12/96
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Several pages devoted to French research project for the study of marine hydrothermal vents bacteria, "GDR Bactocean", are now accessible:
Front page for a direct access to all pages linked to this topic
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12/12/96
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GDR Bactocean Program for 1993-1995.
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12/19/96
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BIOTECH "Biotechnology of Extremophiles" programme: An advertizing brochure issued by the project managers. On line.
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01/09/97
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Updated Links and
Collaborations pages.
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01/22/97
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La Fondations des Treilles Meeting proceedings, held in Les Treilles (France), july 18-24, 1996 : LUCA, the Last Universal Common Ancestor, as enthusiastically revealed by P. Forterre.
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02/10/97
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Added Complete Laboratory directory
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02/19/97
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BIOTECH "Extremophiles as Cell Factories" programme:
The next step in our laboratory's commitment to European Union Biotechnology programs. These pages are presenting the technical annex of the project proposal.
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03/03/97
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Prof. Patrick Forterre's Home Page in French is now online. Please note: this page is a major improvement over the english version.
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08/01/97
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The server has been throught a reorganization process for several weeks now. The "re-vamping" of the server is now finished, and as soon as I'll be back from hollidays, it'll start growing up again. Meanwhile, you can have a look at the following new pages:
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08/01/97
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SiteMap Page. For a better access to the information.
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08/01/97
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Meetings & Posters Page. You can view all the pages dealing with Meetings and Posters at a single sight.
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08/01/97
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Gallery Page. Inauguration of a new chapter of the server. Still in construction though, as it deals with much graphical material, which is rather time-consuming. Just have a look to get a sample of what's going on.
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08/29/97
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HomePage for Danièle Gadelle is onLine.
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09/02/97
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Protection of DNA against Thermodegradation by Salts at Temperatures Typical for Hyperthermophiles. Poster from "First Meeting of the Cell Factories EU BIOTECH Project" by E. Marguet and P. Forterre.Now onLine.
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09/30/97
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The Tanganydro '96 Expedition : Searching for thermophilic prokaryotes in hydrothermal sediments of Lake Tanganyika, East Africa. A personnal account the journey, by our collaborator Evelyne Marguet.
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10/01/97
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Pluriformation Genomes Page under construction but already available. Work is in progress , be patient.
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11/10/97
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Added French version of The Tanganydro '96 Expedition pages.
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11/13/97
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"La bactérie hyperthermophile Thermotoga maritima possède à la fois une ADN gyrase et une reverse gyrase" . Poster displayed during "2ème Journée des Boursiers de l'Association pour la Recherche sur le Cancer".
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11/20/97
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Intrinsic ATPase Activity of the B Subunit of DNA Topoisomerase VI from Sulfolobus Shibatae Poster by C. Buhler, P. Forterre and A Bergerat displayed during " The Eighth Conference on DNA Topoisomerases in Therapy " October 17-15, 1997, Amsterdam (The Netherlands).
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01/05/98
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An atypical type II DNA topoisomerase from Archaea with implication for meiotic recombination. Nature (386, 414-417, 1997)
A overview of one of the lab's last publications issued in "CNRS Info", CNRS 's media information journal
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03/23/98
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The Archaeal Chromosomes: Diverse Patterns of DNA Topology and Topoisomerases Activities
Poster by P.Forterre, P. Lopez-Garcia, O. Guipaud, D. Gadelle and A. Bergerat displayed during the KEYSTONE symposia on Molecular and Cellular Biology: Bacterial Chromosomes, Santa Fe New Mexico, February 6-12 1998.
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10/13/98
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Gamma irradiation effect on the hyperthermophilic archaeon Pyrococcus abyssi.
Poster by Emmanuelle Gérard, Edmond Jolivet, Daniel Prieur and Patrick Forterre
Displayed during Thermophiles 98 Conference, Brest , France September 6-11 1998
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10/20/98
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Control of DNA Supercoiling during Thermal Stress in Hyperthermophilic Archaea
Poster by Purificación LÓPEZ-GARCÍA and Patrick FORTERRE
Displayed during Thermophiles 98 Conference, Brest , France September 6-11 1998
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12/01/98
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HomePage for Cyril Buhler is onLine.
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12/01/98
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HomePage for Stéphanie Marsin is onLine.
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09/13/99
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Pyrococcus abyssi genome sequencing project homed at LBMGE (CLOSED ON 01/16/02)
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03/28/00
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Looking for LUCA. English translation of the popular "A la recherche de LUCA" page. Kindly translated to english by Dr. John Fuerst
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12/01/00
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The PACE CASE page . WWW supporting data for paper published in TIG (Dec- 2000)
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03/19/01
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Sulfolobus solfataricus P2 complete genome sequencing project homed at LBMGE Orsay, France.
The sequencing project is over, the final annotation is nearly finished.
The P2 sequence database is public.
This is a joint European/Canadian project.
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09/12/01
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The server gets a new skin !
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09/20/01
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On Line Search in the Reference Data Base page is closed
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09/20/01
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Public opening of the Genomics ToolBox page. WWW tools implemented on this server by Y. Zivanovic to help people in doing genome research.
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09/24/01
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Genomes at LBMGE : a new page advertising lab's involvement in some genome sequencing projects
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10/03/01
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HomePage for Cyril Buhler update
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23/10/01
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DNA Topoisomerase VI: a type II DNA topoisomerase present in Archaea and Eukarya
Poster by Cyril Buhler , Joyce H.G. Lebbink , Chantal Bocs, Rudolf Ladenstein, and Patrick Forterre
Displayed during Gordon Conference 01 on "Archaea: Ecology, Metabolism and Molecular Biology"
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01/04/02
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FIRST ANNOUCEMENT:
"From Genome to Life" International Summer School
Cargèse, Corsica, France July 15th to 27th, 2002
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01/16/02
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New Genome & Re-annotation DataBase :
Pyrococcus abyssi genome sequencing project homed at LBMGE
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02/25/02
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IFR Génome web page
Institut Fédératif de Recherche "Génome: Structure, Fonction, Evolution" . Large genomics collaborative framework (Orsay , Université Paris-XI, Gif sur Yvette, CNRS , Institut Curie d'Orsay)
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10/15/02
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DNA topoisomerase VI of the hyperthermophilic crenarchaeon Sulfolobus shibatae.
Poster by C. Bocs, C.Buhler, D. Gadelle, I. Sorel, H. van Tilbeurgh and Patrick Forterre
Displayed during ‘Extremophiles 2002‘: 4th International congress on Extremophiles
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11/12/02
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A new tool in genomics toolbox : GENOME GUTS: Direct access to genomes inner parts such as genomic sequence, up and dowstream genes regions and orf lists
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11/25/02
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COG GUESS is a genomics toolbox new page: Clusters of Orthologous Groups sequence assignements
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14/01/03
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Colloque Evolution, Génomes et Développement à la mémoire d'André Adoutte
Gif-sur-Yvette, France, 6-7 février 2003
Orgnized by IFR GENOME: Function , structure and evolution
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17/02/03
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New tool in genomics toolbox : Multalin :Protein and DNA sequences multiple alignment tool , using progressive pairwise alignments
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10/04/03
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Photo gallery for "Colloque Evolution, Génomes et Développement"
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04/12/03
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Opening local access to BLAST queries in All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF (nr & nt)
This is a restricted access area
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27/06/06 |
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Bacteriophage T5 Genome Sequencing Project
This a joint project by: Transports Membranaires de Macromolécules, IBBMC Orsay France / LBMGE IGM, Orsay France / EAN IGM, Orsay France |
2004-2009
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Thermococcus gammatolerans:
Annotation, blast, sequences,transcriptome data
Joint project by: LBMGE IGM, Orsay France& EAN IGM, Orsay France |
2008-2009 |
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Acidobacteria :
Acidobacteria clones from Ionian Sea Project
Joint project Y.Zivanovic/Unité d'Ecologie, Systématique et Evolution UMR8079 , Orsay - France |
2009- |
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Verrucobacteria & Other :
Verrucobacteria & Other clones from Adriatic & South Atlantic seas Projectt
Joint project Y.Zivanovic/Unité d'Ecologie, Systématique et Evolution UMR8079 , Orsay - France |
2009-2012
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Evoldeep project :
Evolutionary and population genomics of deep-sea uncultivated microorganisms
Joint project Y.Zivanovic/Unité d'Ecologie, Systématique et Evolution UMR8079 , Orsay - France |
09/2012
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Syntenizer, a new genomics toolbox implementation:
Discover multi-genomes syntenic relationships at gene environment levels, draw genome pairs scatter plots |
07/2021
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Vampirococcus lugosii sequence and annotation database
Reductive evolution and unique predatory mode in the CPR bacterium Vampirococcus lugosii NATURE COMMUNICATIONS | (2021)12:2454 | https://doi.org/10.1038/s41467-021-22762-4 |
08/2024
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Viral Genomes : Microviridae in Sphagnum- dominated peatlands sequence and annotation database
Diversity and comparative genomics of Microviridae in Sphagnum-dominated peatlands Front. Microbiol | (2015) 6:375 | http://dx.doi.org/10.3389/fmicb.2015.00375 |
08/2024
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Viral Genomes : Cruciviruses: chimeric viruses in Sphagnum- dominated peatlands sequence and annotation database
Diversity and comparative genomics of chimeric viruses in Sphagnum-dominated peatlands Virus evolution, | (2016) 2(2), vew025. | https://doi.org/10.1093/ve/vew025 |
08/2024
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Deinococcus radiodurans R1 ATCC 13939 [DEEP SEQUENCING] sequence and annotation database
Characterization of the Radiation Desiccation Response Regulon of the Radioresistant Bacterium Deinococcus radiodurans by Integrative Genomic Analyses. Cells | (2021) Sep 25;10(10):2536. | https://doi.org/10.3390/cells10102536 |
08/2024
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Acidobacteria clones sequence and annotation database
Comparative analysis of genome fragments of Acidobacteria from deep Mediterranean plankton. Environ Microbiol. 2008 Oct;10(10):2704-17. | https://doi.org/10.1111/j.1462-2920.2008.01691.x |
08/2024
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Nakaseomyces genomes backup database
Custom database of publicly available Nakaseomyces genomes/scaffolds for the benefit of local searchers. |